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Re: [soot] compiling multiple class files

yes, you are right. Just be careful of the java package. For example, to
sootify all classes under directory 'java', you can use command

java soot.Main --process-path java

But if you have some classes under FOO, and classes has no explicit
package. You should enter directory FOO and use command

java soot.Main --process-path .

rather than  java soot.Main --process-path FOO.

Try more, --process-path option should recurively process all .class files
under the path.

feng